Shellfish harvest area water quality

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Most bivalve shellfish (such as mussels, oysters, clams and scallops) are filter feeders that accumulate contaminants, such as bacteria and pollutants, from their surroundings. When contaminants have the potential to make shellfish unsafe to eat, harvest areas are closed to ensure food safety. Water classification recommendations are made based on bacterial levels measured in water samples and pollution concerns identified through shoreline surveys. The proportion of shellfish harvest areas where the water is classified as approved or conditionally approved is a partial measure of the quality of marine coastal water. 

National

National shellfish harvest area water quality

Key results

  • In 2021, the water in 65% of Canada's monitored shellfish harvest areas was classified as approved or conditionally approved. This proportion has declined slightly since 2010.

Percentage of shellfish harvest areas where the water quality was classified as approved or conditonally approved, Canada, 2010 to 2021

Percentage of shellfish harvest areas where the water was classified as approved or conditonally approved, Canada, 2010 to 2021 (see data table below for the long description)
Data table for the long description
Percentage of shellfish harvest areas where the water quality was classified as approved or conditonally approved, Canada, 2010 to 2021
Year Approved or conditionally approved shellfish harvest areas
(percentage)
Total harvest area
(square kilometres)
2010 73 15 426
2011 71 14 625
2012 69 14 981
2013 69 15 026
2014 69 15 061
2015 69 14 920
2016 68 14 931
2017 68 14 885
2018 68 14 839
2019 67 14 776
2020 66 14 310
2021 65 14 288
Download data file (Excel/CSV; 1.06 KB)

How this indicator was calculated

Note: Shellfish harvest area water quality classifications for human consumption are based on contamination by fecal coliform bacteria (microorganisms that originate from human and animal waste), potential pollution sources and other considerations. Refer to Table 1 in the Data sources and methods for more information on the classification definitions based on fecal coliform bacteria levels. 
Source: Environment and Climate Change Canada (2022) Shellfish Water Classification Program.

Shellfish may be harvested from areas where the water quality is classified as approved with appropriate permits where applicable. Harvesting shellfish from areas where the water quality is classified as restricted is not permitted except with a licence under the Management of Contaminated Fisheries Regulations. Shellfish harvested from areas where the water is classified as restricted must undergo a decontamination process before they can be safely consumed. See Table 1 for more information regarding the classification definitions.

Regional

Regional shellfish harvest area water quality

Key results

  • On the Quebec coast, the water quality in 68% of all monitored shellfish harvest areas was classified as approved or conditionally approved, compared to 66% on the Pacific coast and 63% on the Atlantic coast
  • Since 2010, the percentage of shellfish harvest areas where the water quality was classified as approved on the Quebec coast has gradually declined, with a more noticeable decline from 2019 to 2020
  • Along the Atlantic and Pacific coasts, the percentage of areas where the water quality was classified as approved has been relatively stable since 2012

Percentage of regional shellfish harvest areas where the water quality was classified as approved or conditionally approved, Canada, 2010 to 2021

Percentage of regional shellfish harvest areas where the water quality was classified as approved or conditionally approved, Canada, 2010 to 2021 (see data table below for the long description)
Data table for the long description
Percentage of regional shellfish harvest areas where the water quality was classified as approved or conditionally approved, Canada, 2010 to 2021
Year Atlantic
(percentage of approved or conditionally approved areas)
Atlantic
(square kilometres)
Quebec
(percentage of approved or conditionally approved areas)
Quebec
(square kilometres)
Pacific
(percentage of approved or conditionally approved areas)
Pacific
(square kilometres)
2010 64 6 683 80 4 120 77 4 623
2011 64 6 343 80 4 126 72 4 156
2012 64 6 424 78 4 144 69 4 413
2013 64 6 424 77 4 197 69 4 403
2014 64 6 433 76 4 197 71 4 431
2015 64 6 435 76 4 152 69 4 333
2016 63 6 441 75 4 211 69 4 279
2017 63 6 432 74 4 210 69 4 243
2018 63 6 434 74 4 211 68 4 194
2019 63 6 435 74 4 260 67 4 081
2020 63 6 403 69 3 844 67 4 063
2021 63 6 403 68 3 835 66 4 050

Download data file (Excel/CSV; 1.35 KB)

How this indicator was calculated

Note: Shellfish harvest area water quality classification for human consumption is partially based on contamination by fecal coliform bacteria (microorganisms that originate from human and animal waste),potential pollution sources and other considerations. Monitoring is performed along the coast of the Pacific region (British Columbia), Atlantic region (New Brunswick, Newfoundland and Labrador, Nova Scotia, and Prince Edward Island), and Quebec (banks along the St. Lawrence River and the Gulf of St. Lawrence). Refer to the Data sources and methods section for more information on the classification definitions based on fecal coliform bacteria levels (Table 1) and to view the locations of monitoring areas.
Source: Environment and Climate Change Canada (2022) Shellfish Water Classification Program.

The decline in the percentage of harvest areas where the water quality is classified as approved or conditionally approved along the Quebec coast is mainly due to improved knowledge such as new potential sources of pollution or extent of harvesting activity in a given area, or lack thereof. 

Bacteriological quality

Shellfish harvest area bacteriological water quality

Key results

  • In 2021, fecal coliform levels below the threshold of 43 most probable number (MPNFootnote 1 ) per 100 mL were found in:
    • 97% of all samples collected from the Quebec coast
    • 97% of all samples collected from the Pacific coast
    • 95% of all samples collected from the Atlantic coast

Percentage of shellfish harvest area sites with safe bacteriological levels, Canada, 2010 to 2021

Percentage of shellfish harvest area sites with safe bacteriological levels, Canada, 2010 to 2021 (see data table below for the long description)
Data table for the long description
Percentage of shellfish harvest area sites with safe bacteriological levels, Canada, 2010 to 2021
Year Atlantic
(percentage of monitoring areas with no samples exceeding 43 MPN per 100 mL)
Pacific
(percentage of monitoring areas with no samples exceeding 43 MPN per 100 mL)
Quebec
(percentage of monitoring areas with no samples exceeding 43 MPN per 100 mL)
2010 76 94 94
2011 77 94 96
2012 82 93 96
2013 79 92 94
2014 81 91 97
2015 82 91 95
2016 84 94 98
2017 91 91 94
2018 87 93 98
2019 85 95 99
2020 91 91 98
2021 95 97 97

Download data file (Excel/CSV; 1.35 KB)

How this indicator was calculated

Note: A fecal coliform level of 43 MPN per 100 mL was used as the threshold as samples with fecal coliform concentrations above this level suggest that shellfish harvested in the area could be hazardous for human consumption. Fecal coliform MPN measures the potential of disease-causing bacteria to be present in significant concentrations. It is one of the factors considered when classifying the water in a shellfish harvest area. As such, the microbial water quality may not demonstrate similar trends to the percentage of areas where the water is classified as approved or conditionally approved. 
Source: Environment and Climate Change Canada (2022) Shellfish Water Classification Program.

Fecal coliform are bacteria that originate from human and animal waste. The presence of fecal coliform in water reflects the extent of sanitary pollutionFootnote 2  and their concentration is one of the criteria used to classify the water quality in shellfish harvest areas. When high fecal coliform levels are detected, it suggests that the consumption of shellfish harvested in the area could be hazardous to human health; this would result in the water being classified as restricted and the shellfish harvesting area would be closed.

Sampling in shellfish harvesting areas that have had long standing water classification of restricted or prohibited, often due to a known pollution source, is sometimes stopped. With some exceptions, areas where the water is classified as prohibited are not sampled. Sample sites may also be moved to focus on areas where the water is classified as approved, rather than on areas where it is already known to be restricted. As a result, a meaningful comparison of the percentage of monitoring sites with fecal coliform levels below 43 MPN per 100 mL between years cannot be made.

About the indicators

What the indicators measure

If unsafe bacterial levels are measured in water samples or if shoreline surveys identify pollution concerns, Environment and Climate Change Canada makes water classification recommendations to its Canadian Shellfish Sanitation Program partners. Fisheries and Oceans Canada opens or closes shellfish harvest areas based on those recommendations. While elements of program operations and implementation have some impact on the results, the indicators track the proportion of shellfish harvest areas that have their water quality classified as approved or conditionally approved and the proportion of samples with fecal coliform levels less than 43 most probable number (MPN) per 100 mL as a coarse measure of the quality of marine coastal water. 

Why these indicators are important

The fecal coliform levels in marine waters of shellfish harvest areas are monitored to ensure that shellfish are safe for human consumption. The indicators provide a measure of the quality of, and the extent of bacterial contamination in, marine coastal waters where shellfish might be harvested.

Related initiatives

These indicators support the measurement of progress towards the following 2022 to 2026 Federal Sustainable Development Strategy long-term goal: Conserve and protect Canada's Oceans.

In addition, the indicators contribute to the Sustainable Development Goals of the 2030 Agenda for Sustainable Development. They are linked to Goal 14: Life below water.

Related indicators

The Monitoring disposal at sea indicator reports on the number of disposal sites that show no evidence of pollution in order to determine whether marine disposal site activities have an environmental impact.

The Marine pollution spills indicator reports on oil spills along Canada's coasts that are detected through surveillance. This type of marine pollution could affect water quality in shellfish harvest areas

Data sources and methods

Data sources and methods

Data sources

Water sampling and classification analysis for the indicators are conducted under Environment and Climate Change Canada's Shellfish Water Classification Program.

Data are available for all regions from 2010 to 2021. They represent the classified shellfish harvest areas along the Atlantic, Quebec and Pacific coasts where harvesting is active, or prohibited.

Water classification and sampling data of the shellfish harvest areas can be found on the Open Government Portal.

More information

Due to changes in the Shellfish Water Classification Program, shellfish harvest area classification data from prior to 2010 are not included.

Shellfish Water Classification Program

The Shellfish Water Classification Program is part of the Canadian Shellfish Sanitation Program, a food safety program led by the Canadian Food Inspection Agency in partnership with Environment and Climate Change Canada and Fisheries and Oceans Canada.

The Shellfish Water Classification Program collects information through area surveys and bacteriological monitoring. Sampling to monitor for fecal coliform bacteria is conducted under varied environmental conditions to ensure that microbiological contamination does not exceed the appropriate guidelines.

That information is the basis for the water classification of each area.

Location of monitoring stations

Monitoring is performed along the coast of the Pacific region (British Columbia), Atlantic region (New Brunswick, Newfoundland and Labrador, Nova Scotia, and Prince Edward Island), and Quebec (banks along the St. Lawrence River and the Gulf of St. Lawrence). The following map identifies the different monitoring areas from which data were collected. 

Shellfish harvest water monitoring areas, Canada, 2010 to 2021

Shellfish harvest water monitoring areas, Canada, 2010 to 2021 (see long description below)

Note: While this map represents data collection areas from 2010 to 2021, many of these locations are not currently active. Many water monitoring areas have not been sampled in recent years due to harvest area closures, the presence of nearby contamination sites, or resource limitations.
Source: Environment and Climate Change Canada (2011) Shellfish Water Classification Program.

Long description

The map shows the location of all the water monitoring areas that contribute to the Shellfish harvest area water quality indicator. The areas are located along the coast of British Columbia, Quebec (banks along the St. Lawrence River and the Gulf of St. Lawrence) and the Atlantic provinces.

Methods

The indicators are the proportion of shellfish harvest areas that have their water classified as approved or conditionally approved and the proportion of samples collected with fecal coliform most probable number (MPN) less than 43 per 100 mL. Unless the data suggests that there is a food safety risk, monitored areas that have their water classified as approved are generally safe for harvest from that standpoint. The status of a harvest area should always be confirmed prior to harvesting.

More information

Area classifications

Shellfish harvesting is prohibited in areas where the water is unclassified. Interested harvesters must send a written classification request to the Regional Interdepartmental Shellfish Committee (the Committee) to access resources in unclassified areas. If accepted, the Committee will direct the appropriate authorities to proceed with the classification process. Harvesting might be permitted if the area has the water classified as approved or conditionally approved, or with a depurationFootnote 3  permit for areas where the water is classified as restricted.

Site surveys

Site surveys are conducted for each area. They identify actual and potential sources of sanitary pollution and evaluate the meteorological and hydrographic factors that can affect the distribution of microbiological contamination.

Three (3) types of surveys are conducted:

  • Comprehensive surveys are conducted when a new area is established and no historical data are available or where significant changes have occurred to sanitary conditions of the area
  • Annual review surveys are conducted to reassess existing areas. This is to ensure that no significant change has occurred in the area and that the current water classification is still appropriate
  • Re-evaluation surveys update the water classification of an area by requiring an in depth assessment every 3 years. A re-evaluation survey may be required within 1 year depending on the outcome of an annual review

The surveys are paired with bacteriological monitoring and may include a shoreline pollution source investigation.

Bacteriological monitoring

Bacteriological monitoring is conducted to determine the extent of microbiological contamination in marine waters. It is conducted throughout the year and under various environmental conditions to ensure that seasonal factors are considered.

Based on the results, the water classification of an area will be recommended by Environment and Climate Change Canada for regulatory implementation by Fisheries and Oceans Canada. Definitions of the different water classifications are provided in the table below.

Table 1. Shellfish harvest area water classifications
Classification Definition Guideline
Approved Shellfish can be harvested from these areas. The area is not contaminated with fecal material, pathogenic microorganisms, or poisonous or deleterious substances to the extent that consumption of the shellfish might be hazardous.
The median fecal coliform most probable number (MPN) does not exceed 14/100 mL, and no more than 10% of the samples may exceed a fecal coliform MPN of 43/100 mL; or the geometric mean fecal coliform MPN does not exceed 14/100 mL, and the estimated 90th percentile of fecal coliform MPNs does not exceed 43/100 mL.Footnote 4 
Conditionally approved The area meets the approved classification criteria for a defined period.
The site meets the approved requirements for a defined period, but is subject to intermittent pollution and fails to meet them at predictable or controllable times. When approved requirements are not met, the site is placed in closed status.
Restricted The area exceeds the standard for the approved classification to the extent that consumption of the shellfish might be hazardous. Shellfish harvest in the area is not permitted, except by special licence requiring that the shellfish go through a purification process prior to consumption.
The site fails to meet the approved requirements, but it is not contaminated enough to be classified as prohibited.
Conditionally restricted The area meets, at a minimum, the restricted classification criteria for a defined period.
The site meets the restricted criteria but is subject to intermittent pollution and fails to meet restricted criteria at predictable or controllable times. When restricted criteria are not met, the site is placed in closed status.
Prohibited Shellfish are not permitted to be harvested from prohibited areas for any purpose, with the exception of licensed and regulated harvest for seed, spat and bait and for scientific purposes.
The site is located near pollution sources and shellfish decontamination cannot be performed adequately due to the degree of contamination.

For more information, consult the Canadian Shellfish Sanitation Program Manual.

Caveats and limitations

This indicator looks at shellfish harvest area water classification based on the measured concentrations and potential for microbiological contamination. It does not provide an analysis, nor does it account for chemical or biotoxin contamination.

Classification boundaries are defined with respect to a variety of factors. Therefore, they are frequently modified and small changes in the monitored area occur over time.

The waters in areas may be classified as prohibited even if routine monitoring indicates that bacteria levels are approved. That includes buffer zones around current and potential pollution sources and wharves as a precautionary measure. In addition, areas with bacteria levels less than 43 MPN per 100 mL may be classified as prohibited if shellfish are contaminated with biotoxins that cause shellfish poisoning or chemical contaminants.

Closure boundaries are drawn for enforcement purposes and may exceed the boundary of the potential pollution and often any shellfish resources within it.

The main objective of monitoring water quality in shellfish harvest areas is to ensure that the shellfish remain safe for human consumption. Highly contaminated areas are typically not monitored as they are already closed to harvesting. Therefore, the indicator does not provide a complete picture of the bacteriological quality of marine waters.

The Shellfish Water Classification Program conducts additional analysis on the results of the bacteriological water sampling that is not captured in the indicator. As such, it does not represent the complete bacteriological analysis.

Although Environment and Climate Change Canada assesses shellfish harvest areas to determine levels of microbiological contamination of the water, those classifications do not reflect whether shellfish harvesting is authorized at a particular location. Areas where the water is classified as approved may be closed temporarily due to significant weather events, sewage bypasses, or elevated biotoxin contamination as monitored by the Canadian Food Inspection Agency. For more information on the status of shellfish harvest areas, see Fisheries and Oceans Canada's Fishery Openings and Closures and Shellfish Harvesting Map.

Resources

Resources

References

Canadian Food Inspection Agency (2022) Canadian Shellfish Sanitation Program Manual. Retrieved on October 31, 2022.

Related information

Canadian Shellfish Sanitation Program

Fishery Openings and Closures

Management of Contaminated Fisheries Regulations

Shellfish Harvesting Map

Shellfish Water Classification Program

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