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Respiratory Virus Report, Week 36 ending September 8, 2018

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Organization: Public Health Agency of Canada

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List of abbreviations
A(H1N1)pdm09
Influenza A(H1N1)pdm09
A(H3)
Influenza A(H3N2)
A (UnS)
Influenza A (Unsubtyped)
Adeno
Adenovirus
CHEO
Children's Hospital of Eastern Ontario
Coron
Coronavirus
Entero
Enterovirus
hMPV
human metapneumovirus
HSC
Health Sciences Centre
N.A
Not Applicable
P.H.L.
Public Health Laboratory
P.H.O.L.
Public Health Ontario Laboratory
PIV
Parainfluenza
Rhino
Rhinovirus
RSV
Respiratory syncytial virus
UHN
University Health Network

Respiratory Virus Detections and Isolations

Table 1: Respiratory Virus Detections/Isolations for the week ending September 8, 2018 (Reporting Week 201836)
Table 1: Respiratory Virus Detections/Isolations for the week ending September 8, 2018 (Reporting Week 201836)
Reporting Laboratory Flu Tested A(H1N1)pdm09 Positive A(H3) Positive A(UnS) Positive Total Flu A Positive Total Flu B Positive RSV Tested RSV Positive PIV Tested PIV 1 Positive PIV 2 Positive PIV 3 Positive PIV 4 Positive Other PIV Positive Adeno Tested Adeno Positive hMPV Tested hMPV Positive Entero/Rhino Tested Entero/Rhino Positive Coron Tested Coron Positive
Newfoundland 19 0 0 0 0 0 19 0 19 0 0 0 0 0 19 0 19 0 19 5 N.A. N.A.
Prince Edward Island 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 1 1 1 0
Nova Scotia 11 0 0 0 0 0 11 0 3 0 0 0 0 0 3 0 3 0 3 0 3 0
New Brunswick 70 0 0 0 0 0 70 0 26 0 0 0 0 0 26 1 26 0 26 3 26 0
Atlantic 101 0 0 0 0 0 100 0 49 0 0 0 0 0 49 1 49 0 49 9 30 0
Région Nord-Est 15 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 N.A. N.A. 0 0
Québec-Chaudière-Appalaches 43 0 0 0 0 0 44 0 45 1 1 0 0 0 45 0 43 0 N.A. N.A. 43 0
Centre-du-Québec 10 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 N.A. N.A. 0 0
Montréal-Laval   378 0 0 0 0 0 397 4 359 0 7 2 2 0 359 7 350 2 N.A. N.A. 350 0
Ouest du Québec 24 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 N.A. N.A. 0 0
Montérégie 7 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 N.A. N.A. 0 0
Province of Québec 477 0 0 0 0 0 492 4 404 1 8 2 2 0 404 7 393 2 N.A. N.A. 393 0
Ottawa P.H.L. 7 0 0 0 0 0 7 0 7 0 0 0 0 0 7 0 6 0 1 0 0 0
CHEO - Ottawa 56 0 0 0 0 0 56 0 18 0 0 0 0 0 18 2 18 0 18 6 18 0
Kingston P.H.L. 10 0 0 0 0 0 7 0 7 0 0 0 0 0 7 0 7 0 0 0 0 0
UHN / Mount Sinai Hospital 140 0 0 1 1 0 140 0 9 0 0 0 0 0 0 0 9 0 N.A. N.A. N.A. N.A.
P.H.O.L. - Toronto   153 4 5 0 9 0 139 1 139 0 4 1 0 0 139 0 134 0 5 0 0 0
Sick Kids Hospital - Toronto 36 0 0 0 0 0 36 0 36 0 0 1 1 0 36 2 36 0 36 14 36 0
Sunnybrook & Women's College HSC 28 0 0 0 0 0 28 0 28 0 0 0 0 0 28 0 28 0 28 3 28 0
Sault Ste. Marie P.H.L. 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Timmins P.H.L. 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
St. Joseph's - London   23 0 0 0 0 0 23 0 23 0 0 2 0 0 23 0 23 0 23 4 23 0
London P.H.L. 28 0 0 0 0 0 28 0 28 0 1 0 0 0 28 0 26 0 2 0 0 0
Orillia P.H.L.   4 0 0 0 0 0 2 0 2 0 0 0 0 0 2 0 2 0 0 0 0 0
Thunder Bay P.H.L. 2 0 0 0 0 0 2 0 2 0 0 0 0 0 2 0 0 0 2 0 0 0
Sudbury P.H.L.   2 0 0 0 0 0 2 0 2 0 0 0 0 0 2 0 2 0 0 0 0 0
Hamilton P.H.L. 27 0 0 0 0 0 25 2 25 0 0 0 0 0 25 0 24 0 1 0 0 0
Peterborough P.H.L. 5 0 0 0 0 0 5 0 5 0 0 0 0 0 5 0 5 0 0 0 0 0
Province of Ontario 521 4 5 1 10 0 500 3 331 0 5 4 1 0 322 4 320 0 116 27 105 0
Manitoba    99 0 0 0 0 0 96 0 76 0 0 0 1 0 76 2 0 0 76 13 34 0
Regina   81 0 0 0 0 0 81 0 81 0 1 2 0 0 81 1 81 0 81 29 81 0
Saskatoon    51 0 0 0 0 0 51 0 51 0 0 0 0 0 51 3 51 0 51 12 51 0
Province of Saskatchewan 132 0 0 0 0 0 132 0 132 0 1 2 0 0 132 4 132 0 132 41 132 0
Province of Alberta 330 0 2 0 2 0 304 0 304 0 2 7 4 0 304 3 304 1 304 81 304 2
Prairies 561 0 2 0 2 0 532 0 512 0 3 9 5 0 512 9 436 1 512 135 470 2
British Columbia 167 0 0 1 1 0 167 0 131 1 0 1 4 0 131 3 131 0 112 27 112 0
Yukon 1 0 0 0 0 0 1 0 N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A.
Northwest Territories 4 0 0 0 0 0 4 0 4 0 0 0 0 0 4 1 4 0 4 2 4 0
Nunavut 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 1 1 1 0
Territories 6 0 0 0 0 0 6 0 5 0 0 0 0 0 5 1 5 0 5 3 5 0
CANADA 1833 4 7 2 13 0 1797 7 1432 2 16 16 12 0 1423 25 1334 3 794 201 1115 2

Specimens from Yukon (YT), Northwest Territories (NT) and Nunavut (NU) are sent to reference laboratories in other provinces and reported results reflect specimens identified as originating from YT, NT or NU.

Delays in the reporting of data may cause data to change retrospectively.
Table 2: Respiratory Virus Detections/Isolations for the period August 26, 2018 - September 8, 2018 (Reporting Weeks 201835-201836)
Table 2: Respiratory Virus Detections/Isolations for the period August 26, 2018 - September 8, 2018 (Reporting Weeks 201835-201836)
Reporting Laboratory Flu Tested A(H1N1)pdm09 Positive A(H3) Positive A(UnS) Positive Total Flu A Positive Total Flu B Positive RSV Tested RSV Positive PIV Tested PIV 1 Positive PIV 2 Positive PIV 3 Positive PIV 4 Positive Other PIV Positive Adeno Tested Adeno Positive hMPV Tested hMPV Positive Entero/Rhino Tested Entero/Rhino Positive Coron Tested Coron Positive
Newfoundland 41 0 0 0 0 0 41 0 41 0 0 0 0 0 41 0 41 0 41 12 N.A. N.A.
Prince Edward Island 4 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 4 0 4 1 4 0
Nova Scotia 15 0 0 0 0 0 15 0 4 0 0 0 0 0 4 0 4 0 4 0 4 0
New Brunswick 101 0 0 0 0 0 101 0 57 0 0 0 0 0 57 3 57 0 57 7 57 0
Atlantic 161 0 0 0 0 0 157 0 106 0 0 0 0 0 106 3 106 0 106 20 65 0
Région Nord-Est 29 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 N.A. N.A. 0 0
Québec-Chaudière-Appalaches 94 0 0 0 0 0 102 1 99 1 2 0 0 0 101 0 94 0 N.A. N.A. 94 0
Centre-du-Québec 26 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 N.A. N.A. 0 0
Montréal-Laval   729 0 0 2 2 0 763 9 687 1 13 5 3 0 687 18 667 4 N.A. N.A. 667 2
Ouest du Québec 40 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 N.A. N.A. 0 0
Montérégie 30 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 N.A. N.A. 0 0
Province of Québec 948 0 0 2 2 0 981 10 786 2 15 5 3 0 788 18 761 4 N.A. N.A. 761 2
Ottawa P.H.L. 25 0 0 0 0 0 24 0 24 0 0 0 0 0 24 0 23 0 1 0 0 0
CHEO - Ottawa 101 0 0 0 0 0 101 0 34 0 0 1 0 0 34 2 34 0 34 8 34 0
Kingston P.H.L. 19 0 0 0 0 0 16 0 16 0 0 0 0 0 16 0 16 0 2 0 0 0
UHN / Mount Sinai Hospital 292 0 0 1 1 0 292 0 18 0 0 0 0 0 0 0 18 0 N.A. N.A. N.A. N.A.
P.H.O.L. - Toronto   294 7 5 0 12 0 276 2 276 0 4 1 0 0 276 0 266 1 14 0 0 0
Sick Kids Hospital - Toronto 72 0 0 0 0 0 72 0 72 0 1 2 2 0 72 2 72 1 72 22 72 0
Sunnybrook & Women's College HSC 58 0 0 0 0 0 58 0 58 0 0 1 0 0 58 0 58 0 58 9 58 0
Sault Ste. Marie P.H.L. 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0
Timmins P.H.L. 2 0 0 0 0 0 2 0 2 0 0 0 0 0 2 0 1 0 1 0 0 0
St. Joseph's - London   23 0 0 0 0 0 23 0 23 0 0 2 0 0 23 0 23 0 23 4 23 0
London P.H.L. 54 0 0 0 0 0 54 1 54 0 1 0 0 0 54 0 51 0 3 0 0 0
Orillia P.H.L.   12 0 0 0 0 0 10 0 10 0 0 0 0 0 10 0 9 0 1 0 0 0
Thunder Bay P.H.L. 7 0 0 0 0 0 7 0 7 0 0 0 0 0 7 0 5 0 2 0 0 0
Sudbury P.H.L.   9 0 0 0 0 0 9 0 9 0 0 0 0 0 9 0 7 0 2 0 0 0
Hamilton P.H.L. 49 0 0 0 0 0 45 2 45 0 0 0 0 0 45 0 44 0 1 0 0 0
Peterborough P.H.L. 14 0 0 0 0 0 14 0 14 0 0 0 0 0 14 0 14 0 0 0 0 0
Province of Ontario 1032 7 5 1 13 0 1004 5 663 0 6 7 2 0 645 4 642 2 214 43 187 0
Manitoba    192 0 0 0 0 0 188 0 149 0 0 0 1 0 149 2 32 0 149 26 66 0
Regina   179 0 0 0 0 0 179 0 179 0 2 5 0 0 179 2 179 0 179 66 179 0
Saskatoon    91 0 0 0 0 0 91 0 91 0 0 0 0 0 91 5 91 0 91 21 91 0
Province of Saskatchewan 270 0 0 0 0 0 270 0 270 0 2 5 0 0 270 7 270 0 270 87 270 0
Province of Alberta 654 3 4 0 7 0 600 0 600 1 4 11 6 0 600 7 600 3 600 170 600 4
Prairies 1116 3 4 0 7 0 1058 0 1019 1 6 16 7 0 1019 16 902 3 1019 283 936 4
British Columbia 322 1 0 2 3 0 322 1 254 1 0 8 4 0 254 3 254 0 220 45 220 0
Yukon 3 0 0 0 0 0 3 0 N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A.
Northwest Territories 11 0 0 0 0 0 11 0 11 0 0 0 0 0 11 2 11 0 11 5 11 0
Nunavut 3 0 0 0 0 0 3 0 3 0 0 0 0 0 3 0 3 0 3 2 3 0
Territories 17 0 0 0 0 0 17 0 14 0 0 0 0 0 14 2 14 0 14 7 14 0
CANADA 3596 11 9 5 25 0 3539 16 2842 4 27 36 16 0 2826 46 2679 9 1573 398 2183 6

Specimens from YT, NT and NU are sent to reference laboratories in other provinces and reported results reflect specimens identified as originating from YT, NT or NU.

Delays in the reporting of data may cause data to change retrospectively.

Due to reporting delays, the sum of weekly report totals do not add up to cumulative totals.

Number of positive laboratory tests for other respiratory viruses

Figure 1: Number positive laboratory tests for other respiratory viruses by report week, Canada, 2018-2019

Figure 1. Text version below.

Figure 1: Number positive laboratory tests for other respiratory viruses by report week, Canada, 2018-19 - Text description
Number positive laboratory tests for other respiratory viruses by report week, Canada, 2018-19
Week ParaInfluenza Adenovirus Human metapneumovirus Enterovirus/Rhinovirus Coronavirus Respiratory syncytial virus
35 35 21 6 196 4 9
36 48 25 3 202 2 7

Positive Influenza tests

Figure 2: Positive Influenza Tests (%) in Canada by Region by Week of Report

Figure 2. Text version below.

Figure 2: Positive Influenza Tests (%) in Canada by Region by Week of Report - Text description
Positive Influenza Tests (%) in Canada by Region by Week of Report
Week Week end Can Tests Can A
%		 Can B
%		 Atl Tests Atl A
%		 Atl B
%		 QC Tests QC A
%		 QC B
%		 ON Tests ON A
%		 ON B
%		 Pr Tests Pr A
%		 Pr B
%		 BC Tests BC A
%		 BC B
%		 Terr Tests Terr A
%		 Terr B
%
35 2018-09-01 1763 0.68 0.00 60 0.00 0.00 471 0.42 0.00 511 0.59 0.00 555 0.90 0.00 155 1.29 0.00 11 0 0
36 2018-09-08 1833 0.71 0.00 101 0.00 0.00 477 0.00 0.00 521 1.92 0.00 561 0.36 0.00 167 0.60 0.00 6 0 0

Positive Respiratory synctial virus tests

Figure 3: Positive Respiratory syncytial virus (RSV) Tests (%) in Canada by Region by Week of Report

Figure 3. Text version below.

Figure 3: Positive Respiratory syncytial virus (RSV) Tests (%) in Canada by Region by Week of Report - Text description
Positive Respiratory syncytial virus (RSV) Tests (%) in Canada by Region by Week of Report
Week Week end Can Tests RSV
%		 Atl Tests RSV
%		 QC Tests RSV
%		 ON Tests RSV
%		 Pr Tests RSV
%		 BC Tests RSV
%		 Terr Tests RSV
%
35 2018-09-01 1742 0.52 57 0 489 1.23 504 0.4 526 0 155 0.65 11 0
36 2018-09-08 1797 0.39 100 0 492 0.81 500 0.6 532 0 167 0 6 0

Positive Parainfluenza tests

Figure 4: Positive Parainfluenza (PIV) Tests (%) in Canada by Region by Week of Report

Figure 4. Text version below.

Figure 4: Positive Parainfluenza (PIV) Tests (%) in Canada by Region by Week of Report - Text description
Positive Parainfluenza (PIV) Tests (%) in Canada by Region by Week of Report
Week Week End Canada Tests PIV
%		 Atl Tests PIV
%		 QC Tests PIV
%		 ON Tests PIV
%		 Pr Tests PIV
%		 BC Tests PIV
%
35 2018-09-01 1400 2.5 57 0 382 3.14 332 1.51 507 2.56 111 4.5
36 2018-09-08 1442 3.33 49 0 404 3.22 331 3.02 512 3.32 141 5.67

Positive Adenovirus tests

Figure 5: Positive Adenovirus (adeno) Tests (%) in Canada by Region by Week of Report

Figure 5. Text version below.

Figure 5: Positive Adenovirus (adeno) Tests (%) in Canada by Region by Week of Report - Text description
Positive Adenovirus (adeno) Tests (%) in Canada by Region by Week of Report
Week Week End Can Tests Adeno
%		 Atl Tests Adeno
%		 QC Tests Adeno
%		 ON Tests Adeno
%		 Pr Tests Adeno
%		 BC Tests Adeno
%
35 2018-09-01 1393 1.51 57 3.51 384 2.86 323 0 507 1.38 111 0
36 2018-09-08 1433 1.74 49 2.04 404 1.73 322 1.24 512 1.76 141 2.13

Positive Human metapneumovirus tests

Figure 6: Positive human metapneumovirus (hMPV) Tests (%) in Canada by Region by Week of Report

Figure 6. Text version below.

Figure 6: Positive human metapneumovirus (hMPV) Tests (%) in Canada by Region by Week of Report - Text description
Positive human metapneumovirus (hMPV) Tests (%) in Canada by Region by Week of Report
Week Week End Can Tests hMPV
%		 Atl Tests hMPV
%		 QC Tests hMPV
%		 ON Tests hMPV
%		 Pr Tests hMPV
%		 BC Tests hMPV
%
35 2018-09-01 1335 0.45 57 0.00 368 0.54 322 0.62 466 0.43 111 0
36 2018-09-08 1344 0.22 49 0.00 393 0.51 320 0 436 0.23 141 0

Positive Enterovirus/Rhinovirus tests

Figure 7: Positive Enterovirus/Rhinovirus (entero/rhino) Tests (%) in Canada by Region by Week of Report

Figure 7. Text version below.

Figure 7: Positive Enterovirus/Rhinovirus (entero/rhino) Tests (%) in Canada by Region by Week of Report - Text description
Positive Enterovirus/Rhinovirus (entero/rhino) Tests (%) in Canada by Region by Week of Report
Week Week End Canada Tests Entero/rhino
%		 Atl Tests Entero/rhino
%		 QC Tests Entero/rhino
%		 ON Tests Entero/rhino
%		 Pr Tests Entero/rhino
%		 BC Tests Entero/rhino
%
35 2018-09-01 769 25.49 57 19.3 N.A. N.A. 98 16.33 507 29.19 96 17.71
36 2018-09-08 804 25.12 49 18.37 N.A. N.A. 116 23.28 512 26.37 122 22.95

Positive Coronovirus tests

Figure 8: Positive Coronavirus (coron) Tests (%) in Canada by Region by Week of Report

Figure 8. Text version below.

Figure 8: Positive Coronavirus (coron) Tests (%) in Canada by Region by Week of Report - Text description
Positive Coronavirus (coron) Tests (%) in Canada by Region by Week of Report
Week Week End Canada Tests Coron
%		 Atl Tests Coron
%		 QC Tests Coron
%		 ON Tests Coron
%		 Pr Tests Coron
%		 BC Tests Coron
%
35 2018-09-01 1058 0.38 35 0 368 0.54 82 0 466 0.43 96 0
36 2018-09-08 1125 0.18 30 0 393 0 105 0 470 0.43 122 0

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